DNA Binding Motif

						

			
Accessions: Zur (DBTBS 1.0)

			
Names: Zur
Organisms: Bacillus subtilis
Libraries: DBTBS 1.0 1
1 Sierro N, Makita Y, de Hoon M, Nakai K. DBTBS: a database of transcriptional regulation in Bacillus subtilis containing upstream intergenic conservation information. Nucleic acids research 36:D93-6 (2008). [Pubmed]
Length: 14
Consensus: AAATCGTWATCATT
Weblogo: 
PSSM: P0      A      C      G      T
01      1      0      0      0      A
02      1      0      0      0      A
03      1      0      0      0      A
04      0      0      0      1      T
05      0      1      0      0      C
06      0      0      1      0      G
07      0      0      0      1      T
08   0.69      0      0   0.31      W
09      1      0      0      0      A
10      0      0      0      1      T
11   0.21   0.79      0      0      C
12      1      0      0      0      A
13      0      0      0      1      T
14      0      0      0      1      T
Binding TFs: Zur (Ferric uptake regulator family)
Binding Sites: ycdH_2
yciA_2
yciC_2
			
Publications: Gaballa A, Wang T, Ye R.W, Helmann J.D. Functional analysis of the Bacillus subtilis Zur regulon. Journal of bacteriology 184:6508-14 (2002). [Pubmed]


Gaballa A, Helmann J.D. Identification of a zinc-specific metalloregulatory protein, Zur, controlling zinc transport operons in Bacillus subtilis. Journal of bacteriology 180:5815-21 (1998). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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