DNA Binding Motif
| Accessions: | MA1648.1 (JASPAR 2024) |
| Names: | TCF12, TCF12(var.2) |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 11 |
| Consensus: | ssCACCTGCys |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 13014 19393 16996 12473 s 02 14835 17594 18560 10887 s 03 955 57848 1186 1887 C 04 52529 2007 5607 1733 A 05 744 55598 3780 1754 C 06 1913 55765 3536 662 C 07 1380 3886 2625 53985 T 08 2819 2088 55922 1047 G 09 1089 55061 2314 3412 C 10 13867 17603 14293 16113 y 11 11414 18154 20060 12248 s |
| Type: | Heterodimer |
| Binding TFs: | Q99081 (Helix-loop-helix DNA-binding domain) Q99081 |
| Binding Sites: | MA1648.1.19 MA1648.1.1 MA1648.1.19 MA1648.1.20 MA1648.1.10 MA1648.1.16 MA1648.1.10 / MA1648.1.4 MA1648.1.13 / MA1648.1.6 MA1648.1.11 / MA1648.1.5 MA1648.1.12 MA1648.1.14 MA1648.1.15 / MA1648.1.7 MA1648.1.16 MA1648.1.17 / MA1648.1.8 MA1648.1.18 / MA1648.1.9 MA1648.1.2 MA1648.1.3 MA1648.1.4 MA1648.1.5 MA1648.1.6 MA1648.1.7 MA1648.1.3 / MA1648.1.8 MA1648.1.9 MA1648.1.11 / MA1648.1.15 MA1648.1.12 MA1648.1.13 MA1648.1.14 MA1648.1.17 MA1648.1.18 MA1648.1.20 |
| Publications: | Doyle K, Zhang Y, Baer R, Bina M. Distinguishable patterns of protein-DNA interactions involving complexes of basic helix-loop-helix proteins. J Biol Chem 269:12099-105 (1994). [Pubmed] |
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