DNA Binding Motif

						

			
Accessions: 1hw2_AB (3D-footprint 20231221)

			
Names: FATTY ACID METABOLISM REGULATOR PROTEIN
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: FADR-DNA COMPLEX: TRANSCRIPTIONAL CONTROL OF FATTY ACID METABOLISM IN ECHERICHIA COLI
Length: 10
Consensus: TGGTCCGACC
Weblogo: 
PSSM: P0      A      C      G      T
01      5      7      5     79      T
02      0      0     96      0      G
03      0      0     96      0      G
04      7     11     11     67      T
05     11     69      5     11      C
06      0     96      0      0      C
07      1      5     90      0      G
08     67     11     13      5      A
09      0     96      0      0      C
10      0     96      0      0      C
Binding TFs: 1hw2_A / 1hw2_B (Bacterial regulatory proteins, gntR family, FadR C-terminal domain)
Binding Sites: 1hw2_D
1hw2_E
			
Publications: Xu Y., Heath RJ., Li Z., Rock CO., White SW. The FadR.DNA complex. Transcriptional control of fatty acid metabolism in Escherichia coli. J Biol Chem. 276(20):17373-9 (2001). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.