DNA Binding Motif

						

			
Accessions: M0018 (AthalianaCistrome v4_May2016)

			
Names: ERF7.DAP, T15697;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 21
Consensus: ycdycgccdyCkCCGCCGyca
Weblogo: 
PSSM: P0      A      C      G      T
01     72    278     52    191      y
02     81    307     69    136      c
03    170     95    169    159      d
04     92    321     28    152      y
05     74    362     44    113      c
06    142    105    202    144      g
07     78    314     54    147      c
08     83    366     18    126      c
09    173     63    172    185      d
10     39    321     55    178      y
11     87    411     20     75      C
12    125     20    230    218      k
13     37    467     40     49      C
14     50    525      0     18      C
15     70      0    494     29      G
16      6    574      0     13      C
17      0    593      0      0      C
18     55      0    520     18      G
19      4    327     10    252      y
20     89    394     35     75      c
21    316     24    133    120      a
Binding TFs: T15697 (AP2 domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.