DNA Binding Motif
| Accessions: | MA0529.2 (JASPAR 2024) |
| Names: | BEAF-32 |
| Organisms: | Drosophila melanogaster |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 12 |
| Consensus: | rmTATCGATAky |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 1772 1048 1556 1126 r 02 1612 1825 711 1354 m 03 539 460 97 4406 T 04 5151 51 96 204 A 05 98 112 79 5213 T 06 26 5423 13 40 C 07 40 13 5423 26 G 08 5213 79 112 98 A 09 204 96 51 5151 T 10 4406 97 460 539 A 11 1354 711 1825 1612 k 12 1126 1556 1048 1772 y |
| Type: | Heterodimer |
| Binding TFs: | Q94513 (BED zinc finger, BESS motif) Q94513 |
| Binding Sites: | MA0529.2.1 MA0529.2.10 MA0529.2.11 MA0529.2.12 MA0529.2.13 MA0529.2.14 MA0529.2.15 MA0529.2.16 MA0529.2.17 MA0529.2.18 MA0529.2.19 MA0529.2.2 MA0529.2.20 MA0529.2.3 MA0529.2.4 MA0529.2.5 MA0529.2.6 MA0529.2.7 MA0529.2.8 MA0529.2.9 |
| Publications: | Yang J, Ramos E, Corces V.G. The BEAF-32 insulator coordinates genome organization and function during the evolution of Drosophila species. Genome research 22:2199-207 (2012). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.