DNA Binding Motif

						

			
Accessions: UN0546.2 (JASPAR 2024)

			
Names: GCM1::HOXB13
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 14
Consensus: CCCsCAcCmATAAM
Weblogo: 
PSSM: P0      A      C      G      T
01      0    117      3      0      C
02      4    117      2      0      C
03     29    117      0     23      C
04     60     66    117      9      s
05      0    117      9     21      C
06    117     22     17      4      A
07      0     78     24     18      c
08      2     99      5     10      C
09     76     41     10     36      m
10    117      0     22      0      A
11      0      0      2    117      T
12    117      9      8     36      A
13    117      1     10      0      A
14    117     45      6      0      M
Type: Heterodimer
Binding TFs: Q9NP62 (GCM motif protein)
Q9NP62
			
	
			


			

				

				
				
				
				

			

			

		

	
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