DNA Binding Motif

						

			
Accessions: 1mdy_CD (3D-footprint 20231221)

			
Names: PROTEIN (MYOD BHLH DOMAIN)
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: CRYSTAL STRUCTURE OF MYOD BHLH DOMAIN BOUND TO DNA: PERSPECTIVES ON DNA RECOGNITION AND IMPLICATIONS FOR TRANSCRIPTIONAL ACTIVATION
Length: 7
Consensus: CAnnTGt
Weblogo: 
PSSM: P0      A      C      G      T
01      0     96      0      0      C
02     78      6      6      6      A
03     24     24     24     24      n
04     24     24     24     24      n
05      8      7      7     74      T
06      0      0     96      0      G
07     19     19     19     39      t
Binding TFs: 1mdy_C / 1mdy_D (Helix-loop-helix DNA-binding domain)
Binding Sites: 1mdy_G / 1mdy_H
			
Publications: Ma P. C. M., Rould M. A., Weintraub H., Pabo C. O. Crystal structure of MyoD bHLH domain-DNA complex: perspectives on DNA recognition and implications for transcriptional activation. Cell 77:451-459 (1994). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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