DNA Binding Motif
| Accessions: | MA1110.2 (JASPAR 2024) |
| Names: | Nr1H4 |
| Organisms: | Mus musculus |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 10 |
| Consensus: | vsAGGTCAsk |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 1210 1262 1239 1025 v 02 1154 1227 1700 655 s 03 4597 83 49 7 A 04 13 150 4542 31 G 05 31 4 4671 30 G 06 1 0 0 4735 T 07 163 4351 10 212 C 08 4589 29 118 0 A 09 878 1352 1427 1079 s 10 984 1104 1214 1434 k |
| Type: | Heterodimer |
| Binding TFs: | Q60641 (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains)) Q60641 |
| Binding Sites: | MA1110.2.1 MA1110.2.10 / MA1110.2.13 MA1110.2.11 / MA1110.2.14 MA1110.2.12 / MA1110.2.15 MA1110.2.13 / MA1110.2.17 MA1110.2.14 / MA1110.2.18 MA1110.2.15 / MA1110.2.19 MA1110.2.16 / MA1110.2.20 MA1110.2.17 MA1110.2.18 MA1110.2.19 MA1110.2.2 MA1110.2.20 MA1110.2.3 / MA1110.2.4 MA1110.2.4 / MA1110.2.5 MA1110.2.5 / MA1110.2.6 MA1110.2.6 / MA1110.2.7 MA1110.2.7 / MA1110.2.8 MA1110.2.8 / MA1110.2.9 MA1110.2.11 / MA1110.2.9 MA1110.2.10 MA1110.2.12 MA1110.2.16 MA1110.2.3 |
| Publications: | Hoeke MO, Heegsma J, Hoekstra M, Moshage H, Faber KN. Human FXR regulates SHP expression through direct binding to an LRH-1 binding site, independent of an IR-1 and LRH-1. PLoS One : (2014). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.