DNA Binding Motif

						

			
Accessions: SCRT1_2 (HT-SELEX2 May2017)

			
Names: SCRT1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 11
Consensus: hKCAACAGGTg
Weblogo: 
PSSM: P0      A      C      G      T
01  13618  11088   6808  12807      h
02   2115   2229  44321  16280      K
03      0  44321      0    720      C
04  44321   1322    119   1501      A
05  44321      0      0      0      A
06      0  44321      0      0      C
07  44321      0      0      0      A
08  10149      0  44321      0      G
09      0      0  44321      0      G
10      0    137      0  44321      T
11   9859   4719  20302   9441      g
Binding TFs: SCRT1 (Zinc finger, C2H2 type, Zinc-finger of C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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