DNA Binding Motif
| Accessions: | NsrR (RegulonDB 7.5) |
| Names: | NsrR |
| Organisms: | ECK12 |
| Libraries: | RegulonDB 7.5 1 1 Salgado H, Peralta-Gil M, Gama-Castro S, Santos-Zavaleta A, Muniz-Rascado L, Garcia-Sotelo JS, Weiss V, Solano-Lira H, Martinez-Flores I, Medina-Rivera A, Salgado-Osorio G, Alquicira-Hernandez S, Alquicira-Hernandez K, Lopez-Fuentes A, Porron-Sotelo L, Huerta AM, Bonavides-Martinez C, Balderas-Martinez YI, Pannier L, Olvera M, Labastida A, Jimenez-Jacinto V, Vega-Alvarado L, Del Moral-Chavez V, Hernandez-Alvarez A, Morett E, Collado-Vides J. RegulonDB v8.0: omics data sets, evolutionary conservation, regulatory phrases, cross-validated gold standards and more. Nucleic Acids Res. 2013 Jan 1;41(D1):D203-D213. [Pubmed] |
| Length: | 11 |
| Consensus: | AArATGcwtwT |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 32 0 0 7 A 02 39 0 0 0 A 03 11 9 15 4 r 04 36 0 1 2 A 05 0 0 1 38 T 06 1 0 38 0 G 07 6 22 4 7 c 08 25 1 3 10 w 09 9 3 7 20 t 10 11 3 0 25 w 11 9 1 1 28 T |
| Binding TFs: | ECK120005668 (Transcriptional regulator) |
| Binding Sites: | ECK120016816 ECK120016818 ECK120016820 ECK120016822 ECK120033146 ECK120033147 ECK120033341 ECK120051449 ECK120051482 ECK120051484 ECK120051486 ECK120051488 ECK120051490 ECK120051492 ECK120051495 ECK120051497 ECK120051499 ECK120051501 ECK120051503 ECK120051505 ECK120051507 ECK120051509 ECK120051511 ECK125095350 ECK125095352 ECK125095354 ECK125095357 ECK125095360 ECK125095362 ECK125095364 ECK125095366 ECK125095368 ECK125095370 ECK125095372 ECK125095374 ECK125095376 ECK125095378 ECK125095380 ECK125095382 ECK125095384 |
| Publications: | Bodenmiller DM., Spiro S. The yjeB (nsrR) gene of Escherichia coli encodes a nitric oxide-sensitive transcriptional regulator. J Bacteriol. 188(3):874-81 (2006). [Pubmed] Chismon DL., Browning DF., Farrant GK., Busby SJ. Unusual organisation, complexity and redundancy at the Escherichia coli hcp-hcr operon promoter. Biochem J (2010). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.