DNA Binding Motif

						

			
Accessions: M0045 (AthalianaCistrome v4_May2016)

			
Names: CRF10.DAP, T05609;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: ccdcCkCCGCCGYcr
Weblogo: 
PSSM: P0      A      C      G      T
01     63    345     70    122      c
02     92    361     38    109      c
03    166     68    209    157      d
04     45    362     57    136      c
05     66    485      8     41      C
06     79      7    319    195      k
07      4    547     38     11      C
08     15    578      7      0      C
09     46      0    553      1      G
10      0    590      0     10      C
11      0    600      0      0      C
12     33      0    549     18      G
13      1    432      6    161      Y
14    120    289     58    133      c
15    255     37    182    126      r
Binding TFs: T05609 (AP2 domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.