DNA Binding Motif

						

			
Accessions: MA0141.2 (JASPAR 2024)

			
Names: Esrrb
Organisms: Mus musculus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: ChIP-seq
Length: 12
Consensus: rgsyCAAGGTCA
Weblogo: 
PSSM: P0      A      C      G      T
01   1055    801    984    773      r
02    673    832   1352    767      g
03    403   1212   1212    807      s
04    260   1230    449   1702      y
05    312   2653    630     51      C
06   3347     32    248     27      A
07   3590      2     60      6      A
08     33      2   3597     29      G
09     12     11   3622     16      G
10    180     43    243   3192      T
11      9   3394    167     85      C
12   3478     21    128     26      A
Type: Heterodimer
Binding TFs: Q61539 (Ligand-binding domain of nuclear hormone receptor, Zinc finger, C4 type (two domains))
Q61539
			
Publications: Chen X, Xu H, Yuan P, Fang F, Huss M, Vega V.B, Wong E, Orlov Y.L, Zhang W, Jiang J, Loh Y.H, Yeo H.C, Yeo Z.X, Narang V, Govindarajan K.R, Leong B, Shahab A, Ruan Y, Bourque G, Sung W.K, Clarke N.D, Wei C.L, Ng H.H. Integration of external signaling pathways with the core transcriptional network in embryonic stem cells. Cell 133:1106-17 (2008). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.