DNA Binding Motif

Accessions: MA0633.1 (JASPAR 2024)
Names: Twist2
Organisms: Mus musculus
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: PBM
Length: 10
Consensus: rmCATATGTk
Weblogo:
PSSM: P0 A C G T
01 302 200 298 200 r
02 282 580 69 69 m
03 0 1000 0 0 C
04 1000 0 0 0 A
05 0 217 0 783 T
06 789 0 211 0 A
07 0 0 0 1000 T
08 0 0 1000 0 G
09 50 50 155 745 T
10 181 181 272 365 k
Type: Heterodimer
Binding TFs: Q9D030 (Helix-loop-helix DNA-binding domain)
Q9D030
Publications: Kophengnavong T, Michnowicz J.E, Blackwell T.K. Establishment of distinct MyoD, E2A, and twist DNA binding specificities by different basic region-DNA conformations. Molecular and cellular biology 20:261-72 (2000). [Pubmed]

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