DNA Binding Motif

						

			
Accessions: M0592 (AthalianaCistrome v4_May2016)

			
Names: LHY1.ampDAP, T04538;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 11
Consensus: AGATATTTwtw
Weblogo: 
PSSM: P0      A      C      G      T
01    443     10     48     95      A
02      0      0    596      0      G
03    596      0      0      0      A
04      0      0      0    596      T
05    576      1      0     19      A
06      0      6     16    574      T
07      1      9      0    586      T
08     63     14      6    513      T
09    153     52     80    311      w
10    140    107    104    245      t
11    184    108    141    163      w
Binding TFs: T04538 (Myb-like DNA-binding domain)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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