DNA Binding Motif

						

			
Accessions: MA1888.2 (JASPAR 2024)

			
Names: Irf-b
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: SELEX
Length: 15
Consensus: GAdActrgAGTwTCG
Weblogo: 
PSSM: P0      A      C      G      T
01    124     22    842     12      G
02    858     47     70     25      A
03    419     10    259    312      d
04    940     14     31     15      A
05    126    676    168     30      c
06     97    176     79    648      t
07    299    226    263    213      r
08    199    207    388    207      g
09    883     10     85     21      A
10     15     71    880     33      G
11     19      3      4    974      T
12    259     56     14    672      w
13     10     19     36    935      T
14     29    917     14     40      C
15    107     33    829     31      G
			
Publications: Zhang Z, Wei J, Ren R, Zhang X. Anti-virus effects of interferon regulatory factors (IRFs) identified in ascidian Ciona savignyi. Fish Shellfish Immunol : (2020). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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