DNA Binding Motif
| Accessions: | MA1841.1 (JASPAR 2024) |
| Names: | kn |
| Organisms: | Drosophila melanogaster |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 18 |
| Consensus: | bkrgTCCCcaGGGAcyhs |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 45 83 75 78 b 02 65 62 83 71 k 03 94 30 91 66 r 04 36 50 136 59 g 05 16 18 11 236 T 06 1 277 1 2 C 07 6 252 5 18 C 08 4 259 9 9 C 09 47 174 22 38 c 10 153 25 54 49 a 11 12 6 258 5 G 12 27 7 243 4 G 13 2 5 272 2 G 14 227 8 27 19 A 15 64 130 46 41 c 16 52 101 37 91 y 17 75 72 57 77 h 18 63 78 80 60 s |
| Type: | Heterodimer |
| Binding TFs: | P56721 (IPT/TIG domain) P56721 |
| Binding Sites: | MA1841.1.1 MA1841.1.10 MA1841.1.11 MA1841.1.12 MA1841.1.13 MA1841.1.14 MA1841.1.15 MA1841.1.16 MA1841.1.17 MA1841.1.18 MA1841.1.19 MA1841.1.2 / MA1841.1.3 MA1841.1.20 MA1841.1.3 / MA1841.1.4 MA1841.1.11 / MA1841.1.4 MA1841.1.12 / MA1841.1.5 MA1841.1.14 / MA1841.1.6 MA1841.1.17 / MA1841.1.7 MA1841.1.18 / MA1841.1.8 MA1841.1.9 MA1841.1.10 MA1841.1.13 MA1841.1.15 MA1841.1.16 MA1841.1.19 MA1841.1.2 MA1841.1.20 MA1841.1.5 MA1841.1.6 MA1841.1.7 MA1841.1.8 MA1841.1.9 |
| Publications: | Nitta KR, Jolma A, Yin Y, Morgunova E, Kivioja T, Akhtar J, Hens K, Toivonen J, Deplancke B, Furlong EE, Taipale J. Conservation of transcription factor binding specificities across 600 million years of bilateria evolution. Elife : (2015). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.