DNA Binding Motif
| Accessions: | UP00060A_1 (UniPROBE 20160601) |
| Names: | AA960152, AI875693, Max, Max protein, Myc-associated factor X, Myc-binding novel HLH/LZ protein, Myn, Protein max, Protein myn |
| Organisms: | Mus musculus |
| Libraries: | UniPROBE 20160601 1 1 Hume MA, Barrera LA, Gisselbrecht SS, Bulyk ML. UniPROBE, update 2015: new tools and content for the online database of protein-binding microarray data on protein-DNA interactions. Nucleic Acids Res : (2015). [Pubmed] |
| Length: | 16 |
| Consensus: | kgmsCACGTGgkcrkk |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0.23 0.15 0.30 0.31 k 02 0.20 0.15 0.44 0.21 g 03 0.58 0.27 0.08 0.07 m 04 0.14 0.48 0.31 0.08 s 05 0.02 0.97 0 0 C 06 0.97 0 0.02 0.01 A 07 0 0.91 0.01 0.08 C 08 0.08 0.01 0.91 0 G 09 0.01 0.02 0 0.97 T 10 0 0 0.97 0.02 G 11 0.15 0.24 0.39 0.22 g 12 0.07 0.08 0.27 0.58 k 13 0.19 0.35 0.25 0.22 c 14 0.27 0.23 0.30 0.20 r 15 0.16 0.11 0.48 0.25 k 16 0.17 0.10 0.42 0.30 k |
| Binding TFs: | UP00060A (Helix-loop-helix DNA-binding domain) |
| Binding Sites: | AACACGTG ACACGTGC ACACGTGG ACACGTGT ACCACGTG AGCACGTG ATCACGTG CACACGTG CACGTGAG CACGTGCC CACGTGCG CACGTGGA CACGTGGC CACGTGGG CACGTGTA CACGTGTC CCACGTGA CCACGTGC CCACGTGG GCACGTGC |
| Publications: | Badis G, Berger M.F, Philippakis A.A, Talukder S, Gehrke A.R, Jaeger S.A, Chan E.T, Metzler G, Vedenko A, Chen X, Kuznetsov H, Wang C.F, Coburn D, Newburger D.E, Morris Q, Hughes T.R, Bulyk M.L. Diversity and complexity in DNA recognition by transcription factors. Science (New York, N.Y.) 324:1720-3 (2009). [Pubmed] |
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