DNA Binding Motif

						

			
Accessions: MA1790.1 (JASPAR 2024)

			
Names: NAC073
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: DAP-seq
Length: 15
Consensus: CTTswtcywyAmGyw
Weblogo: 
PSSM: P0      A      C      G      T
01   3.35    985      0 11.725      C
02  5.025      0 199.33    796      T
03      0    6.7  1.675    992      T
04    134    452 388.61 25.126      s
05    320    102 40.201    538      w
06    179    240 189.28 391.96      t
07 185.93    397    218 199.33      c
08    245    260    126    370      y
09    422 26.801 46.901    504      w
10 20.101    586    119    275      y
11    985  8.375      0    6.7      A
12    442    558      0      0      m
13 67.002      0    838 95.477      G
14 80.402    575 53.601    291      y
15    251    221   3.35    524      w
Type: Heterodimer
Binding TFs: O49459 (No apical meristem (NAM) protein)
O49459
			
Publications: Zhong R, Lee C, Ye ZH. Global analysis of direct targets of secondary wall NAC master switches in Arabidopsis. Mol Plant 3:1087-103 (2010). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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