DNA Binding Motif
| Accessions: | 1lcd_A (3D-footprint 20231221) |
| Names: | Lac Repressor |
| Organisms: | Escherichia coli, strain K12 |
| Libraries: | 3D-footprint 20231221 1 1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed] |
| Description: | STRUCTURE OF THE COMPLEX OF LAC REPRESSOR HEADPIECE AND AN 11 BASE-PAIR HALF-OPERATOR DETERMINED BY NUCLEAR MAGNETIC RESONANCE SPECTROSCOPY AND RESTRAINED MOLECULAR DYNAMICS |
| Length: | 7 |
| Consensus: | TnGTGAG |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 11 9 9 67 T 02 24 24 24 24 n 03 11 9 67 9 G 04 0 0 0 96 T 05 0 0 96 0 G 06 96 0 0 0 A 07 11 9 67 9 G |
| Binding TFs: | 1lcd_A (Bacterial regulatory proteins, lacI family) |
| Binding Sites: | 1lcd_B 1lcd_C |
| Publications: | Chuprina V.P, Rullmann J.A, Lamerichs R.M, van Boom J.H, Boelens R, Kaptein R. Structure of the complex of lac repressor headpiece and an 11 base-pair half-operator determined by nuclear magnetic resonance spectroscopy and restrained molecular dynamics. Journal of molecular biology 234:446-62 (1993). [Pubmed] |
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