DNA Binding Motif
| Accessions: | MA0529.1 (JASPAR 2024) |
| Names: | BEAF-32 |
| Organisms: | Drosophila melanogaster |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-chip |
| Length: | 15 |
| Consensus: | kcrmarmtATCGATw |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 746 872 1132 1235 k 02 959 1437 847 742 c 03 1256 847 1309 573 r 04 1871 1358 756 0 m 05 1982 344 671 988 a 06 2196 324 1013 452 r 07 1547 1841 597 0 m 08 745 635 0 2605 t 09 3908 0 77 0 A 10 0 0 0 3985 T 11 0 3985 0 0 C 12 77 0 3908 0 G 13 3613 0 372 0 A 14 428 170 0 3387 T 15 2162 0 788 1035 w |
| Type: | Heterodimer |
| Binding TFs: | Q7JN06 (BESS motif) Q94513 (BED zinc finger, BESS motif) Q94513 |
| Binding Sites: | MA0529.1.1 MA0529.1.10 MA0529.1.11 MA0529.1.12 MA0529.1.13 MA0529.1.14 MA0529.1.15 MA0529.1.16 MA0529.1.17 MA0529.1.18 MA0529.1.19 MA0529.1.2 MA0529.1.20 MA0529.1.3 MA0529.1.4 MA0529.1.5 MA0529.1.6 MA0529.1.7 MA0529.1.8 MA0529.1.9 |
| Publications: | Yang J, Ramos E, Corces V.G. The BEAF-32 insulator coordinates genome organization and function during the evolution of Drosophila species. Genome research 22:2199-207 (2012). [Pubmed] |
Disclaimer and license
These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.