DNA Binding Motif
| Accessions: | MA0161.2 (JASPAR 2024) |
| Names: | NFIC |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 11 |
| Consensus: | twCTTGGCAsa |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 2615 2647 2478 3867 t 02 3896 2137 2086 3488 w 03 412 10542 329 324 C 04 154 303 369 10781 T 05 352 333 177 10745 T 06 310 129 11087 81 G 07 223 121 10973 290 G 08 264 10725 88 530 C 09 10158 397 478 574 A 10 2626 2951 3186 2844 s 11 3344 2712 2760 2791 a |
| Type: | Heterodimer |
| Binding TFs: | P08651 (CTF/NF-I family transcription modulation region, MH1 domain, Nuclear factor I protein pre-N-terminus) P08651 |
| Binding Sites: | MA0161.2.1 MA0161.2.10 MA0161.2.11 MA0161.2.12 MA0161.2.13 MA0161.2.14 MA0161.2.15 MA0161.2.16 MA0161.2.17 MA0161.2.18 MA0161.2.19 MA0161.2.2 MA0161.2.20 MA0161.2.3 MA0161.2.4 MA0161.2.5 MA0161.2.6 MA0161.2.7 MA0161.2.8 MA0161.2.9 |
| Publications: | Roulet E, Busso S, Camargo A.A, Simpson A.J, Mermod N, Bucher P. High-throughput SELEX SAGE method for quantitative modeling of transcription-factor binding sites. Nature biotechnology 20:831-5 (2002). [Pubmed] |
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