DNA Binding Motif

						

			
Accessions: HOXA3_EOMES (HumanTF2 1.0)

			
Names: HOXA3_EOMES
Organisms: Homo sapiens
Libraries: HumanTF2 1.0 1
1 Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]
Notes: Site type: heterodimeric; Experiment type: CAP-SELEX
Length: 13
Consensus: TAAyGagGTGtka
Weblogo: 
PSSM: P0      A      C      G      T
01    238     63     11    910      T
02    910     56     39    150      A
03    910      3     20      8      A
04     11    379     88    910      y
05     27     54    679    231      G
06    910     62    298     71      a
07    338    220    910    266      g
08     22     93    910     83      G
09     72    212     95    910      T
10     58     30    910     47      G
11    118    154    131    507      t
12    137    331    418    493      k
13    910     66    325    181      a
Type: Heterodimer
Binding TFs: EOMES_TF2 (T-box)
HOXA3_TF1 / HOXA3_TF2 (Homeobox domain)
			
Publications: Jolma A, Yin Y, Nitta KR, Dave K, Popov A, Taipale M, Enge M, Kivioja T, Morgunova E, Taipale J. DNA-dependent formation of transcription factor pairs alters their binding specificity. Nature 527:384-8 (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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