DNA Binding Motif

						

			
Accessions: HOXA13_DBD_2 (HumanTF 1.0)

			
Names: HOXA13
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 3
Length: 11
Consensus: sCTCGTAAAam
Weblogo: 
PSSM: P0      A      C      G      T
01    114    286    311    166      s
02     31    878     79     12      C
03      6     39     26    878      T
04     25    878      4    112      C
05    223     11    878      0      G
06      0      4      0    878      T
07    878      9      3    189      A
08    878      0      0     32      A
09    878     12     15     11      A
10    878    230     92    249      a
11    280    287    116    195      m
Binding TFs: HOXA13_DBD (Homeobox domain, Hox protein A13 N terminal)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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