DNA Binding Motif

						

			
Accessions: MA1674.2 (JASPAR 2024)

			
Names: NAC017
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Length: 12
Consensus: awgCAAGTAAhh
Weblogo: 
PSSM: P0      A      C      G      T
01    298    237    240    222      a
02    340    235    156    266      w
03    218    116    527    136      g
04     12    957      9     19      C
05    990      1      0      6      A
06    879     92      7     19      A
07      9      4    978      6      G
08    127     72     60    738      T
09    917     24      6     50      A
10    928      4      6     59      A
11    255    275    193    274      h
12    260    284    153    300      h
Type: Heterodimer
Binding TFs: Q9XIC5 (No apical meristem (NAM) protein)
Q9XIC5
Binding Sites: MA1674.2.1
MA1674.2.10
MA1674.2.11
MA1674.2.12
MA1674.2.13
MA1674.2.14
MA1674.2.15
MA1674.2.16
MA1674.2.17
MA1674.2.18
MA1674.2.19
MA1674.2.2
MA1674.2.20
MA1674.2.3
MA1674.2.4
MA1674.2.5
MA1674.2.6
MA1674.2.7
MA1674.2.8
MA1674.2.9
			
Publications: Ng S, Ivanova A, Duncan O, Law SR, Van Aken O, De Clercq I, Wang Y, Carrie C, Xu L, Kmiec B, Walker H, Van Breusegem F, Whelan J, Giraud E. A membrane-bound NAC transcription factor, ANAC017, mediates mitochondrial retrograde signaling in Arabidopsis. Plant Cell 25:3450-71 (2013). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.