DNA Binding Motif

						

			
Accessions: Hoxc10_DBD_2 (HumanTF 1.0)

			
Names: Hoxc10
Organisms: Mus musculus
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 4
Length: 10
Consensus: gyaATAAAAa
Weblogo: 
PSSM: P0      A      C      G      T
01    851    593   3470    333      g
02     66   1668     19   1802      y
03   3470   1190    360    248      a
04   3470    106     93     25      A
05    110      0     27   3470      T
06   2602     11     45    868      A
07   3470      0      0     40      A
08   3470     47     57    116      A
09   3470    335    294    454      A
10   1644    714    362    749      a
Binding TFs: Hoxc10_DBD (Homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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