DNA Binding Motif

						

			
Accessions: TGIF2_methyl_1 (HT-SELEX2 May2017)

			
Names: TGIF2
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 12
Consensus: TGACAbvTGTCA
Weblogo: 
PSSM: P0      A      C      G      T
01    258    464    141   2353      T
02    142    114   2353     39      G
03   2353     93    234    754      A
04      8   2353     33    108      C
05   2353      9    348     26      A
06    124    637    944    647      b
07    608    939    649    157      v
08     51    383     32   2353      T
09     91     93   2353    108      G
10    820    240     23   2353      T
11     67   2353    210    111      C
12   2353    214    502    287      A
Binding TFs: TGIF2 (Homeobox domain, Homeobox KN domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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