DNA Binding Motif

						

			
Accessions: CEBPB_DBD (HumanTF 1.0), MA0466.2 (JASPAR 2024)

			
Names: CEBPB
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1, JASPAR 2024 2
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 2, HT-SELEX
Length: 10
Consensus: rTTrCGCAAy
Weblogo: 
PSSM: P0      A      C      G      T
01  10585   5007   6282    859      r
02     33     34      8  22732      T
03     17     14   2276  22732      T
04  10930     34  11803   2237      r
05    393  22732    221   2217      C
06   3521    555  22732    486      G
07   2527  22732      3   2135      C
08  22732    636      9      0      A
09  22732      9      0      9      A
10    155  10617    940  12116      y
Type: Heterodimer
Binding TFs: CEBPB_DBD (bZIP transcription factor, Basic region leucine zipper)
P17676 (bZIP transcription factor, Basic region leucine zipper)
P17676
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]


Osada S, Yamamoto H, Nishihara T, Imagawa M. DNA binding specificity of the CCAAT/enhancer-binding protein transcription factor family. J Biol Chem 271:3891-6 (1996). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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