DNA Binding Motif
Accessions: | MA1286.2 (JASPAR 2024) |
Names: | TCP24 |
Organisms: | Arabidopsis thaliana |
Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
Notes: | DAP-seq |
Length: | 8 |
Consensus: | GGGACCAC |
Weblogo: | |
PSSM: | P0 A C G T 01 12 11 553 18 G 02 0 0 593 1 G 03 0 0 594 0 G 04 527 24 26 17 A 05 0 594 0 0 C 06 0 594 0 0 C 07 567 0 27 0 A 08 16 560 9 9 C |
Type: | Heterodimer |
Binding TFs: | Q9C758 (TCP family transcription factor) Q9C758 |
Binding Sites: | MA1286.2.16 MA1286.2.3 MA1286.2.18 MA1286.2.1 MA1286.2.10 MA1286.2.11 MA1286.2.12 MA1286.2.13 MA1286.2.14 MA1286.2.15 MA1286.2.17 MA1286.2.19 MA1286.2.2 MA1286.2.20 MA1286.2.4 MA1286.2.5 MA1286.2.6 MA1286.2.7 MA1286.2.8 MA1286.2.9 |
Publications: | Viola I. L., Uberti Manassero N. G., Ripoll R., Gonzalez D. H. The Arabidopsis class I TCP transcription factor AtTCP11 is a developmental regulator with distinct DNA binding properties due to the presence of threonine at position 15 of the TCP domain.. Biochem. J. 435:143 (2011). [Pubmed] |
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