DNA Binding Motif

						

			
Accessions: MA1849.1 (JASPAR 2024)

			
Names: Creb1
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: SELEX
Length: 22
Consensus: aaakytrTGACGTCAyarmttt
Weblogo: 
PSSM: P0      A      C      G      T
01    266    249    248    238      a
02    282    240    248    231      a
03    284    230    243    244      a
04    241    235    262    262      k
05    171    259    201    369      y
06    188    200    238    374      t
07    495     46    436     23      r
08     10     12      6    971      T
09      7     19    941     32      G
10    986      4      5      5      A
11      3    988      3      6      C
12      6      3    988      3      G
13      5      5      4    986      T
14     32    941     19      7      C
15    971      6     12     10      A
16     23    436     46    495      y
17    374    238    200    188      a
18    369    201    259    171      r
19    262    262    235    241      m
20    244    243    230    284      t
21    231    248    240    282      t
22    238    248    249    266      t
			
Publications: José-Edwards DS, Oda-Ishii I, Kugler JE, Passamaneck YJ, Katikala L, Nibu Y, Di Gregorio A. Brachyury, Foxa2 and the cis-Regulatory Origins of the Notochord. PLoS Genet : (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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