DNA Binding Motif

						

			
Accessions: 3dnv_AB (3D-footprint 20231221), 3dnv_B (3D-footprint 20231221)

			
Names: HTH-type transcriptional regulator hipB
Organisms: Escherichia coli, strain K12
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: MDT Protein
Length: 4
Consensus: TATc
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0      0     96      T
02     96      0      0      0      A
03      9      9      9     69      T
04     19     38     20     19      c
Binding TFs: 3dnv_B (Helix-turn-helix, Helix-turn-helix domain, Cro/C1-type HTH DNA-binding domain, Helix-turn-helix domain, Helix-turn-helix domain)
Binding Sites: 3dnv_T
			
Publications: Schumacher M.A, Piro K.M, Xu W, Hansen S, Lewis K, Brennan R.G. Molecular mechanisms of HipA-mediated multidrug tolerance and its neutralization by HipB. Science (New York, N.Y.) 323:396-401 (2009). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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