DNA Binding Motif

						

			
Accessions: ZFP41_2 (HT-SELEX2 May2017), UN0154.1 (JASPAR 2024)

			
Names: ZFP41
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1, JASPAR 2024 2
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

2 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 15
Consensus: yGCTAACTCTCCrcr
Weblogo: 
PSSM: P0      A      C      G      T
01   1991   3137   2698   3099      y
02    164     13  10825      0      G
03   1180   9715    367    939      C
04    319   1030    547  10277      T
05  10383   1253     61    404      A
06  10923      2      0      1      A
07      0  10924      0      3      C
08     13    183      0  10800      T
09      0  10923      3      0      C
10      0     11      6  10914      T
11      0  10922      3      5      C
12    222  10922      3      2      C
13   3534    884   6976    269      r
14    622   8929    584   3264      c
15   4933   2620   3738   2131      r
Type: Heterodimer
Binding TFs: Q8N8Y5 / ZFP41 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
Q8N8Y5
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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