DNA Binding Motif
| Accessions: | MA1210.2 (JASPAR 2024) |
| Names: | HAT22 |
| Organisms: | Arabidopsis thaliana |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Length: | 13 |
| Consensus: | wwCAATAATTGww |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 1122 540 543 1011 w 02 950 791 488 987 w 03 362 2470 86 298 C 04 3066 41 21 88 A 05 3127 25 6 58 A 06 55 23 15 3123 T 07 2276 309 309 322 A 08 3128 14 26 48 A 09 52 9 18 3137 T 10 83 20 78 3035 T 11 259 92 2650 215 G 12 1122 406 761 927 w 13 1120 459 607 1030 w |
| Type: | Heterodimer |
| Binding TFs: | P46604 (Homeobox domain, Homeobox associated leucine zipper) P46604 |
| Binding Sites: | MA1210.2.1 MA1210.2.10 MA1210.2.11 MA1210.2.12 MA1210.2.13 MA1210.2.14 MA1210.2.15 MA1210.2.16 MA1210.2.17 MA1210.2.18 MA1210.2.19 MA1210.2.2 MA1210.2.20 MA1210.2.3 MA1210.2.4 MA1210.2.5 MA1210.2.6 MA1210.2.7 MA1210.2.8 MA1210.2.9 |
| Publications: | Sessa G., Morelli G., Ruberti I. The Athb-1 and -2 HD-Zip domains homodimerize forming complexes of different DNA binding specificities. EMBO J. 12:3507-3517 (1993). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.