DNA Binding Motif

						

			
Accessions: MA1739.1 (JASPAR 2024)

			
Names: BHLH122
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: DAP-seq
Length: 14
Consensus: ttdkCmACTTGcmw
Weblogo: 
PSSM: P0      A      C      G      T
01    246    137    201 415.41      t
02 202.68    229    243    325      t
03    365 75.377    270    290      d
04    166 209.38    355    270      k
05 11.725    988      0      0      C
06    551    436      0   13.4      m
07   1000      0      0      0      A
08      0    995  5.025      0      C
09      0      0  1.675    998      T
10  1.675      0      0    998      T
11  1.675      0    998      0      G
12    127    506    137    229      c
13    353    281    132    233      m
14    285    248    114    353      w
Type: Heterodimer
Binding TFs: Q9C690 (Helix-loop-helix DNA-binding domain)
Q9C690
			
Publications: Liu W, Tai H, Li S, Gao W, Zhao M, Xie C, Li WX. bHLH122 is important for drought and osmotic stress resistance in Arabidopsis and in the repression of ABA catabolism. New Phytol 201:1192-1204 (2014). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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