DNA Binding Motif

						

			
Accessions: 3brf_A (3D-footprint 20231221)

			
Names: Lin-12 and glp-1 phenotype protein 1, isoform a
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: CSL (Lag-1) bound to DNA with Lin-12 RAM peptide, C2221
Length: 8
Consensus: TGTGGGAA
Weblogo: 
PSSM: P0      A      C      G      T
01      7      7      9     73      T
02      9      7     73      7      G
03      0      0      0     96      T
04      0      0     96      0      G
05      7      9     73      7      G
06      0      0     96      0      G
07     96      0      0      0      A
08     75      7      7      7      A
Binding TFs: 3brf_A (IPT/TIG domain, Beta-trefoil DNA-binding domain, LAG1, DNA binding)
Binding Sites: 3brf_B
3brf_C
			
Publications: Friedmann D.R, Wilson J.J, Kovall R.A. RAM-induced allostery facilitates assembly of a notch pathway active transcription complex. The Journal of biological chemistry 283:14781-91 (2008). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.