DNA Binding Motif

						

			
Accessions: Hoxa11_DBD_2 (HumanTF 1.0)

			
Names: Hoxa11
Organisms: Mus musculus
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: monomeric; SELEX cycle: 4
Length: 11
Consensus: rgymATwAAah
Weblogo: 
PSSM: P0      A      C      G      T
01    102     75    160     67      r
02    156    210    404    128      g
03      0    213      4    190      y
04    404    417     75     30      m
05    404     93     61      1      A
06     30      0      0    404      T
07    246     14      4    157      w
08    404      0      0     23      A
09    404     31      4      1      A
10    404    137     76     93      a
11    114    102     72    116      h
Binding TFs: Hoxa11_DBD (Homeobox domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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