DNA Binding Motif

						

			
Accessions: MA0819.3 (JASPAR 2024)

			
Names: CLOCK
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: CAP-SELEX
Length: 7
Consensus: aCACGTG
Weblogo: 
PSSM: P0      A      C      G      T
01   2009    584    383     89      a
02    146   2009      0      0      C
03   2009      3     52      0      A
04      0   2009      4    302      C
05    244     11   2009      0      G
06      7     87      6   2009      T
07      5      1   2009     52      G
Type: Heterodimer
Binding TFs: O15516 (Helix-loop-helix DNA-binding domain, PAS fold, PAS fold)
O15516
			
Publications: Yoshitane H, Ozaki H, Terajima H, Du NH, Suzuki Y, Fujimori T, Kosaka N, Shimba S, Sugano S, Takagi T, Iwasaki W, Fukada Y. CLOCK-controlled polyphonic regulation of circadian rhythms through canonical and noncanonical E-boxes. Mol Cell Biol 34:1776-87 (2014). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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