DNA Binding Motif

						

			
Accessions: SOX14_methyl_1 (HT-SELEX2 May2017)

			
Names: SOX14
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 10
Consensus: ykmACAATgg
Weblogo: 
PSSM: P0      A      C      G      T
01    478    599    440    560      y
02   1433   1696   2078   2353      k
03   2078   1493   1111   1184      m
04   2078    106    136    344      A
05      0   2078     40    155      C
06   2078      0     52      0      A
07   2078     35     22    128      A
08     60     48      0   2078      T
09    801     99   2078    341      g
10    489    424    733    432      g
Binding TFs: SOX14 (HMG (high mobility group) box, Domain of unknown function (DUF1898))
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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