DNA Binding Motif

						

			
Accessions: VSX1_methyl_1 (HT-SELEX2 May2017)

			
Names: VSX1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 8
Consensus: yyAATTrc
Weblogo: 
PSSM: P0      A      C      G      T
01    726   7127    986   3097      y
02   1110   6798   1156  10224      y
03  10224   2632   1147    585      A
04  10224    158    207      0      A
05      0    219     95  10224      T
06    576   1770   1946  10224      T
07  10224    604   6011    887      r
08   1337   3871   2548   2469      c
Binding TFs: VSX1 (Homeobox domain)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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