DNA Binding Motif

						

			
Accessions: 5ke7_A (3D-footprint 20231221)

			
Names: Krueppel-like factor 4
Organisms: Mus musculus
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: mouse Klf4 ZnF1-3 and TpG/MpA sequence DNA complex structure
Length: 10
Consensus: GcCAnACCTc
Weblogo: 
PSSM: P0      A      C      G      T
01      0      0     96      0      G
02     13     57     13     13      c
03      0     96      0      0      C
04     96      0      0      0      A
05     24     24     24     24      n
06     96      0      0      0      A
07      0     96      0      0      C
08      0     96      0      0      C
09      0      0      0     96      T
10     16     54     13     13      c
Binding TFs: 5ke7_A (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
Binding Sites: 5ke7_B
5ke7_C
			
Publications: Hashimoto H, Wang D, Steves AN, Jin P, Blumenthal RM, Zhang X, Cheng X. Distinctive Klf4 mutants determine preference for DNA methylation status. Nucleic Acids Res 44:10177-10185 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.