DNA Binding Motif

						

			
Accessions: UN0243.2 (JASPAR 2024)

			
Names: ZSCAN1
Organisms: Homo sapiens
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: HT-SELEX
Length: 14
Consensus: RCACACvCTGamAa
Weblogo: 
PSSM: P0      A      C      G      T
01  17333     56  39311      0      R
02      5  56649     15     34      C
03  56655      0     21      0      A
04      0  56660      0      0      C
05  56650     25     38      4      A
06    264  55246    120   2829      C
07  23337  18479  14194    662      v
08    588  56404    121    291      C
09   2292    637   3584  55173      T
10   1669   4509  52300   7052      G
11  39723  11581   6753  10043      a
12  46245  24548    150    688      m
13  56567    190    210    109      A
14  38909  10915   9726   6962      a
Type: Heterodimer
Binding TFs: Q8NBB4 (Zinc finger, C2H2 type, SCAN domain, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger)
Q8NBB4
			
	
			


			

				

				
				
				
				

			

			

		

	
Disclaimer and license


These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.