DNA Binding Motif

						

			
Accessions: M0465 (AthalianaCistrome v4_May2016)

			
Names: LBD2.DAP, T05804;
Organisms: Arabidopsis thaliana
Libraries: AthalianaCistrome v4_May2016 1
1 O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]
Length: 15
Consensus: sCGAarAwatCGGag
Weblogo: 
PSSM: P0      A      C      G      T
01     61    290    203     46      s
02     28    568      2      2      C
03      9      0    555     36      G
04    445     11     97     47      A
05    238    118    102    142      a
06    318     40    185     57      r
07    432     15     53    100      A
08    271     50     51    228      w
09    248     74    135    143      a
10    117     88    101    294      t
11     47    544      0      9      C
12      0      0    600      0      G
13     24    101    432     43      G
14    313    147     45     95      a
15    145     49    323     83      g
Binding TFs: T05804 (Protein of unknown function DUF260)
			
Publications: O'Malley RC, Huang SS, Song L, Lewsey MG, Bartlett A, Nery JR, Galli M, Gallavotti A, Ecker JR. Cistrome and Epicistrome Features Shape the Regulatory DNA Landscape. Cell 165:1280-92 (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.