DNA Binding Motif
| Accessions: | Cf2 (DrosophilaTF 1.1) |
| Names: | Cf2 |
| Organisms: | Drosophila melanogaster |
| Libraries: | DrosophilaTF 1.1 1 1 Down T.A, Bergman C.M, Su J, Hubbard T.J. Large-scale discovery of promoter motifs in Drosophila melanogaster. PLoS computational biology 3:e7 (2007). [Pubmed] |
| Length: | 9 |
| Consensus: | rTATATrTr |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 0.33 0.15 0.51 0.01 r 02 0 0.06 0 0.94 T 03 0.94 0 0.06 0 A 04 0 0.08 0.04 0.88 T 05 0.94 0.02 0.04 0 A 06 0.01 0.04 0 0.95 T 07 0.51 0.03 0.41 0.05 r 08 0.02 0.13 0.02 0.83 T 09 0.63 0.06 0.26 0.05 r |
| Binding TFs: | Cf2 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger, C2H2-type zinc finger) |
| Binding Sites: | Cf2_1 Cf2_10 Cf2_11 Cf2_12 Cf2_13 Cf2_14 Cf2_15 Cf2_16 Cf2_17 Cf2_18 Cf2_19 Cf2_2 Cf2_20 Cf2_21 Cf2_22 Cf2_23 Cf2_24 Cf2_25 Cf2_26 Cf2_27 Cf2_28 Cf2_29 Cf2_3 Cf2_30 Cf2_31 Cf2_32 Cf2_33 Cf2_34 Cf2_35 Cf2_36 Cf2_37 Cf2_38 Cf2_39 Cf2_4 Cf2_40 Cf2_41 Cf2_42 Cf2_43 Cf2_44 Cf2_45 Cf2_46 Cf2_47 Cf2_48 Cf2_49 Cf2_5 Cf2_50 Cf2_51 Cf2_52 Cf2_53 Cf2_54 Cf2_55 Cf2_56 Cf2_57 Cf2_58 Cf2_59 Cf2_6 Cf2_60 Cf2_61 Cf2_62 Cf2_63 Cf2_64 Cf2_65 Cf2_66 Cf2_67 Cf2_68 Cf2_69 Cf2_7 Cf2_70 Cf2_71 Cf2_72 Cf2_73 Cf2_74 Cf2_75 Cf2_76 Cf2_77 Cf2_78 Cf2_79 Cf2_8 Cf2_80 Cf2_9 |
| Publications: | Gogos J. A., Hsu T., Bolton J., Kafatos F. C. Sequence discrimination by alternatively spliced isoforms of a DNA binding Zinc finger domain. Science 257:1951-1955 (1992). [Pubmed] |
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