DNA Binding Motif
| Accessions: | MA1641.1 (JASPAR 2024) |
| Names: | MYF5 |
| Organisms: | Homo sapiens |
| Libraries: | JASPAR 2024 1 1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed] |
| Notes: | ChIP-seq |
| Length: | 12 |
| Consensus: | gvaCAGCTGtbc |
| Weblogo: |  |
| PSSM: | P0 A C G T 01 2698 2700 3258 2554 g 02 3507 2986 3145 1572 v 03 7490 1368 1774 578 a 04 95 10911 161 43 C 05 10965 47 69 129 A 06 100 230 10658 222 G 07 223 10657 230 100 C 08 129 68 47 10966 T 09 42 161 10912 95 G 10 578 1775 1368 7489 t 11 1572 3146 2985 3507 b 12 2554 3258 2701 2697 c |
| Type: | Heterodimer |
| Binding TFs: | P13349 (Helix-loop-helix DNA-binding domain, Myogenic Basic domain, Myogenic determination factor 5) P13349 |
| Binding Sites: | MA1641.1.3 / MA1641.1.5 MA1641.1.4 / MA1641.1.6 MA1641.1.11 MA1641.1.12 MA1641.1.13 MA1641.1.14 MA1641.1.1 / MA1641.1.3 MA1641.1.10 MA1641.1.15 MA1641.1.16 MA1641.1.15 / MA1641.1.17 MA1641.1.16 / MA1641.1.18 MA1641.1.19 MA1641.1.2 / MA1641.1.4 MA1641.1.20 MA1641.1.5 / MA1641.1.7 MA1641.1.6 / MA1641.1.8 MA1641.1.7 MA1641.1.8 MA1641.1.9 MA1641.1.1 MA1641.1.17 MA1641.1.18 MA1641.1.2 |
| Publications: | Conerly ML, Yao Z, Zhong JW, Groudine M, Tapscott SJ. Distinct Activities of Myf5 and MyoD Indicate Separate Roles in Skeletal Muscle Lineage Specification and Differentiation. Dev Cell 36:375-85 (2016). [Pubmed] |
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These data are available AS IS and at your own risk. The EEAD/CSIC do not give any representation or warranty nor assume any liability or responsibility for the data nor the results posted (whether as to their accuracy, completeness, quality or otherwise). Access to these data is available free of charge for ordinary use in the course of research. Downloaded data have CC-BY-NC-SA license. FootprintDB is also available at RSAT::Plants, part of the INB/ELIXIR-ES resources portfolio.