DNA Binding Motif

						

			
Accessions: 5wx9_A (3D-footprint 20231221)

			
Names: Ethylene-responsive transcription factor ERF096
Organisms: Arabidopsis thaliana
Libraries: 3D-footprint 20231221 1
1 Contreras-Moreira B. 3D-footprint: a database for the structural analysis of protein-DNA complexes. Nucleic acids research 38:D91-7 (2010). [Pubmed]
Description: Crystal Structure of AtERF96 with GCC-box
Length: 10
Consensus: CTGGcGGCTa
Weblogo: 
PSSM: P0      A      C      G      T
01      0     96      0      0      C
02      0      0      0     96      T
03      0      0     96      0      G
04      0      0     96      0      G
05     13     57     13     13      c
06      0      0     96      0      G
07      0      0     96      0      G
08      0     96      0      0      C
09      0      0      0     96      T
10     54     13     16     13      a
Binding TFs: 5wx9_A (AP2 domain)
Binding Sites: 5wx9_B
5wx9_C
			
Publications: Chen CY, Lin PH, Chen KH, Cheng YS. Structural insights into Arabidopsis ethylene response factor 96 with an extended N-terminal binding to GCC box. Plant Mol Biol : (2020). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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