DNA Binding Motif

						

			
Accessions: UN0389.2 (JASPAR 2024)

			
Names: AT1G66420
Organisms: Arabidopsis thaliana
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: DAP-seq
Length: 17
Consensus: AacmTTATCCATwwmtt
Weblogo: 
PSSM: P0      A      C      G      T
01    736     38     75    151      A
02    566     75    208    151      a
03    189    660     57     94      c
04    321    528    151      0      m
05      0     19      0    981      T
06    113    189      0    698      T
07    981      0      0     19      A
08      0      0      0   1000      T
09      0    981      0     19      C
10     19    981      0      0      C
11    774      0    132     94      A
12    132    132     38    698      T
13    528     38      0    434      w
14    340     19     57    585      w
15    283    434     75    208      m
16     75    226    113    585      t
17    208     57    170    566      t
Type: Heterodimer
Binding TFs: Q9C517 (Protein of unknown function, DUF573)
Q9C517
			
	
			


			

				

				
				
				
				

			

			

		

	
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