DNA Binding Motif

						

			
Accessions: PRRX1_full_2 (HumanTF 1.0)

			
Names: PRRX1
Organisms: Homo sapiens
Libraries: HumanTF 1.0 1
1 Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]
Notes: Site type: dimeric; SELEX cycle: 2
Length: 11
Consensus: TAAtytAATTA
Weblogo: 
PSSM: P0      A      C      G      T
01     90     53     22    617      T
02    617     29    100     77      A
03    617     21     27     17      A
04     50    211     78    617      t
05     36    354     85    263      y
06     60    285    219    617      t
07    617     31     83     16      A
08    617      9     19      8      A
09      0      2      4    617      T
10     75     63      6    617      T
11    617     13     70     84      A
Binding TFs: PRRX1_full (Homeobox domain, OAR domain)
			
Publications: Jolma A, Yan J, Whitington T, Toivonen J, Nitta KR, Rastas P, Morgunova E, Enge M, Taipale M, Wei G, Palin K, Vaquerizas JM, Vincentelli R, Luscombe NM, Hughes TR, Lemaire P, Ukkonen E, Kivioja T, Taipale J. DNA-Binding Specificities of Human Transcription Factors. Cell. 2013 Jan 17;152(1-2):327-39. [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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