DNA Binding Motif

						

			
Accessions: IRF4_MOUSE.H10MO.C|M01174 (HOCOMOCO 10)

			
Names: Irf4
Organisms: Mus musculus
Libraries: HOCOMOCO 10 1
1 Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]
Notes: Interferon-regulatory factors{3.5.3}; IRF-4 (LSIRF, NF-EM5, MUM1, Pip){3.5.3.0.4}
Length: 16
Consensus: aaaaraGrAAvtGARA
Weblogo: 
PSSM: P0      A      C      G      T
01    812    338    420    213      a
02   1115    127    246    295      a
03   1128    103    320    232      a
04   1041     38    395    309      a
05    783    200    667    133      r
06   1147    103    346    187      a
07    412      2   1355     14      G
08    906      2    873      2      r
09   1778      5      0      0      A
10   1778      1      2      2      A
11    665    612    505      1      v
12    444    169    169   1001      t
13    305     87   1362     29      G
14   1587     44    123     29      A
15   1258     35    488      2      R
16   1578     90    114      1      A
Binding TFs: IRF4_MOUSE (Interferon regulatory factor transcription factor, Interferon-regulatory factor 3)
			
Publications: Kulakovskiy IV, Vorontsov IE, Yevshin IS, Soboleva AV, Kasianov AS, Ashoor H, Ba-Alawi W, Bajic VB, Medvedeva YA, Kolpakov FA, Makeev VJ. HOCOMOCO: expansion and enhancement of the collection of transcription factor binding sites models. Nucleic Acids Res : (2016). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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