DNA Binding Motif

						

			
Accessions: MA1851.1 (JASPAR 2024)

			
Names: Dlx-c
Libraries: JASPAR 2024 1
1 Rauluseviciute I, Riudavets-Puig R, Blanc-Mathieu R, Castro-Mondragon JA, Ferenc K, Kumar V, Lemma RB, Lucas J, Cheneby J, Baranasic D, Khan A, Fornes O, Gundersen S, Johansen M, Hovig E, Lenhard B, Sandelin A, Wasserman WW, Parcy F, Mathelier A. JASPAR 2024: 20th anniversary of the open-access database of transcription factor binding profiles. Nucleic Acids Res : (2023). [Pubmed]
Notes: SELEX
Length: 22
Consensus: wwwwwrrgaTAATTAyytwwww
Weblogo: 
PSSM: P0      A      C      G      T
01    306    184    203    307      w
02    310    178    203    309      w
03    281    185    214    321      w
04    258    202    227    313      w
05    271    206    249    273      w
06    278    208    271    243      r
07    266    239    265    230      r
08    185    164    473    179      g
09    453    156    222    170      a
10     29     97     11    863      T
11    919     22     21     38      A
12    970      7     10     13      A
13     14      8      8    971      T
14     33     18     26    922      T
15    792     10    166     32      A
16    237    272    218    273      y
17    222    274    216    288      y
18    207    246    246    301      t
19    250    242    229    279      w
20    266    237    223    274      w
21    304    215    216    265      w
22    310    202    204    284      w
			
Publications: José-Edwards DS, Oda-Ishii I, Kugler JE, Passamaneck YJ, Katikala L, Nibu Y, Di Gregorio A. Brachyury, Foxa2 and the cis-Regulatory Origins of the Notochord. PLoS Genet : (2015). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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