DNA Binding Motif

						

			
Accessions: MTF1_2 (HT-SELEX2 May2017)

			
Names: MTF1
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 17
Consensus: stTTTGCACACGrcsyt
Weblogo: 
PSSM: P0      A      C      G      T
01   1391   2828   2567   1799      s
02    573   2082    620   5811      t
03     34     11    103   8515      T
04    165    113    146   8344      T
05      0     12      4   8584      T
06      6      8   8574      1      G
07     10   8585      0     11      C
08   8363     63    334      0      A
09     17   8579      1      0      C
10   8539     74     18     15      A
11      6   8588      5      0      C
12      0      8   8579      0      G
13   2330    353   5287   1145      r
14   1548   5465    291   2042      c
15   1448   2679   2632   1827      s
16   1407   3339   1106   3776      y
17   1963   2038   2090   2494      t
Binding TFs: MTF1 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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