DNA Binding Motif

						

			
Accessions: EGR4_2 (HT-SELEX2 May2017)

			
Names: EGR4
Organisms: Homo sapiens
Libraries: HT-SELEX2 May2017 1
1 Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]
Length: 13
Consensus: cmCGCCCACGCAm
Weblogo: 
PSSM: P0      A      C      G      T
01   2178   4683    923   2571      c
02   4798   5558    180    353      m
03     76  10356     16    104      C
04    622     39  10356    326      G
05      0  10356      0      4      C
06      0  10356     12      7      C
07     13  10356      7    446      C
08  10356   2016     26     18      A
09     16  10356      2      4      C
10    344     65  10356    122      G
11     14  10356     28    179      C
12  10356   1166   1991    719      A
13   3082   4044   1007   2223      m
Binding TFs: EGR4 (Zinc finger, C2H2 type, Zinc-finger double domain, C2H2-type zinc finger)
			
Publications: Yin Y, Morgunova E, Jolma A, Kaasinen E, Sahu B, Khund-Sayeed S, Das PK, Kivioja T, Dave K, Zhong F, Nitta KR, Taipale M, Popov A, Ginno PA, Domcke S, Yan J, Schübeler D, Vinson C, Taipale J. Impact of cytosine methylation on DNA binding specificities of human transcription factors. Science : (2017). [Pubmed]

	
			


			

				

				
				
				
				

			

			

		

	
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